PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G194600.1.p
Common NameGLYMA_07G194600
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family FAR1
Protein Properties Length: 324aa    MW: 38139.9 Da    PI: 9.1336
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G194600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR146.21.5e-14143230289
                 FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                          fY   Ak + F v+ks+  ++ +ng+++++tf Cs+ g++++  + ++++r+tr+et ++Cka + v+ ++ +++w+v+k +  HnH++
  Glyma.07G194600.1.p 143 FYTWNAKFTDFFVCKSHVLRN-KNGQVIQQTFLCSRAGEKKRVLSMSQRKRKTRNETCCECKAFFCVHISQhNHNWYVSKGKYYHNHAM 230
                          89999999*********9999.7788****************99999*********************9998***************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.2E-11143230IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MDMMPMKMNM MVMKMHMKAM QATMTTLTMD QLTMQMIMKL IVIDLFSILM GMKMNVMDFM  60
ETKLKMKGMN FMEIKLNIKV MDFIMLKMYL KMKVMIFFGN EDVFEDEGGA KDDILVNVDI  120
GVNADGDDFP RIDFLDHEVA YLFYTWNAKF TDFFVCKSHV LRNKNGQVIQ QTFLCSRAGE  180
KKRVLSMSQR KRKTRNETCC ECKAFFCVHI SQHNHNWYVS KGKYYHNHAM LDRRYCPLLV  240
AHKNMTTTNI MQIDNFRKVG IRIPHIFAAF ANISSGYENV GFVMKDIYNQ YGKQRHEQSF  300
DIIDSETRWT DMVERFGLQN TTR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1188193QRKRKT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0R0J5A10.0A0A0R0J5A1_SOYBN; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3265734
Representative plantOGRP3012351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.11e-10FAR1 family protein